- Basel, Switzerland
- Bressanone, Italy
- Aberystwyth, UK (1988)
- Noordwijkerhout, Netherlands (1990)
- Bombannes, France (1992)
- Schröcken, Austria (1994)
- Louvain-la-Neuve, Belgium (1996)
- BioThermoKinetics in the Post Genomic Era, Göteborg, Sweden (1998)
- Animating the Cellular Map, Stellenbosch, South Africa (2000)
- Integrating Biology, Bordeaux-Arcachon, France (2002)
- Developing concepts for Systems Biology, Oxford, UK (2004)
- Systems Biology: redefining BioThermoKinetics, Trakai, Lithuania (2006)
- Will Bottom-Up Meet Top-Down? Elsinore, Denmark (2008)
- Modern Trends in Systems Biology: Virtual Modelling and Regulation, Vladimir, Russia (2010)
- Energy Metabolism and Ageing, Ameland, Netherlands (2012)
- From Cell to Organism, Durham, UK (2014)
- Dedicated to the memory of Reinhart Heinrich, Jena (2016)
- Tromsø, Norway (2018)
- Innsbruck (2020; hybrid online-on-site meeting)
- Innsbruck (2022)
- Stellenboch, South Africa (2024)
Proceedings of a number of these meetings were published in conference book or journal format:
- 1990 Noordwijkerhout: Westerhoff, H.V. (ed) (1994) Biothermokinetics, Intercept, Andover, UK.
- 1992 Bombannes: Schuster, S., Rigoulet, M., Ouhabi, R. and Mazat, J.-P. (eds), (1993) Modern Trends in Biothermokinetics, Plenum Press, New York and London.
- 1994 Schröcken: Gnaiger, E., Gellerich, F.N. and Wyss, M. (eds.) (1994) What is controlling Life?, Modern Trends in Biothermokinetics 3, Innsbruck University Press, Innsbruck. Parts online
- 1996 Louvain-la-Neuve: Westerhoff,H.V., Snoep, J.L., Wijker, J., Sluse, F.E. and Kholodenko, B.N. (eds.), (1996) BioThermoKinetics of the Living Cell, BioThemoKinetics Press, Amsterdam.
- 1998 Göteborg: Larsson, C., Påhlman, I.-L. and Gustafsson, L. (eds.), (1998) BioThermoKinetics in the Post Genomic Era, Göteborg.
- 2000 Stellenbosch: Hofmeyr J-HS, Rohwer JM and Snoep JL, (eds.) 2000 Animating the Cellular Map. Proceedings of the 9th International Meeting on BioThermoKinetics. (ISBN 0-7972-0776-7).
- 2002 Bordeaux/Arcachon: Molecular Biology Reports 29 Nos. 1-2,
- 2006 Trakai: IEE Proceedings Systems Biology 153 No. 5
- 2008 Elsinore: Hansen, ACH, Koebmann, B and Ruhdal Jensen P (eds) 2008 Will bottom-up meet top-down? Technical University of Denmark, Kongens Lyngby (ISBN 978-87-992690-0-6).
- 2010 Vladimir: Programme and abstracts
- 2012 Ameland: Programme and abstracts
- 2014 Durham: Programme and abstracts